Digestive System

Review

The digestive system plays an important role in the absorption of nutrients into the body.  It takes the food we ingest, breaks it down mechanically and chemically in the mouth and stomach.  It then absorbs nutrients, fats, proteins and water in the intestines before eliminating the waste through the rectum.

Major organs involved in the digestive system include the mouth, stomach, small intestine, large intestine, liver, pancreas.

The main steps in the digestive system

Digestive-System-Diagram

The digestive system is designed to do a few major things. They can be grouped into four categories:

  1. Ingestion
  2. Digestion
  3. Breakdown
  4. Excretion

Following Food from Mouth to Anus

To understand how our food is digested in the digestive system, it might be very useful to follow our food along its normal path, starting from the mouth.

Imagine for just a second that you’re hungry and your eyes gaze upon a nice home cooked thanksgiving turkey dinner. Your mouth starts to water. The salivary glands in your mouth are triggered to start producing saliva, a compound that will aid in the digestion of the meal.

As food enters your mouth, your teeth begin mechanically breaking down the food into small and smaller pieces. The saliva starts to chemically break it down as well. Soon, your conscious mind says, “lets swallow this food.” You swallow it and take another bite.

While you’re thinking about your next bite of food, your nervous system is helping to move the bolus (the food package you swallowed), down throat. A small flap of skin called your epiglottis makes sure your food goes down your esophagus. Movements of the smooth muscles, known as peristalsis help move that bolus down your esophagus. When it reaches your stomach, a sphincter opens and dumps the food in.

Inside the stomach, cells start to secrete different acids that help increase acidity to a pH of 2. This strong acidic environment kills most bacteria and starts to chemically break apart the food.  Movements of the smooth muscles in the stomach, known as peristalsis mix and churn the food up more.  After the food has been well mixed and has a consistency of oatmeal, it is ready to move to the small intestine.  At this stage it is known as chyme.

To move into the small intestine, chyme must pass through the pyloric sphincter.  From here it enters the duodenum, the first part of the small intestine.  The liver mixes in bile, which helps break down fats in the food. The pancreas also secretes digestive enzymes that aid in digestion.

Most of the nutrients are absorbed from the small intestine and moved into the blood stream via a system of small folds, called vili.

After the food moves through the small intestine it enters the large intestine.  The large intestine is named for the diameter of the cavity and not for the length.  It is actually much shorter than the small intestine.  The role of the large intestine is to remove any extra water from the digested material before it is finally excreted.

So there you have it – a basic rundown of what happens to the food we eat from the time we eat it, to when we excrete it. While we didn’t go into detail on all the steps, we would encourage you to explore as much as you can about each step of the process. Review our links below for more detailed explanations of the entire process.

Digestive-System-Diagram2

Digestive System Vocabulary Terms

    • Anus: located at the end of the digestive system. The function of the anus is to expel feces, and unwanted semi-solid material produced during digestion.
    • Appendix: a pouch like structure of the colon. The appendix is located near the junction of the small and large intestines. It is often referred to as the vermiform appendix or cecal appendix. The appendix is thought to be a vestigial structure in humans (an organ that has lost its original function). Today the appendix is prone to infection is often removed at the first sign of a problem.
    • Ascending Colon: The large intestine can be divided up into different regions. The first section that takes digested material up is the ascending colon. It is smaller in caliber than the cecum, with which it is contiguous.
    • Bile: yellowish, blue and green fluid secreted from the liver. Bile is sometimes called gall and is stored in the gallbladder between meals. It is secreted into the duodenum to aid int eh process of digestion of lipids via emulsification.
    • Cecum: the beginning of the large intestine. The cecum is a pouch that connects the ileum with eh ascending colon.
    • Chyme: the name given to the partially digested food that leaves the stomach via the pyloric valve into the small intestine (duodenum). Chyme, also known as chymus has the consistency of oatmeal.
    • Descending Colon: the region of the large intestine that moves digested material downward through the left hypochondrium and lumbar regions.
    • Duodenum: the first section of the small intestine. This hollow, jointed tube is only about 10-12 inches long. It connects the stomach to the jejunum and is where most of the chemical digestion takes place.
    • Epiglottis: a small flap of elastic cartilage just below the pharynx that helps direct food down the esophogus and direct air into the lungs. Without the epiglottis, it would be difficult to
    • Esophagus: a muscular tube that allows food to pass from the pharynx to the stomach. Through peristalsis the esophagus is able to push food from the pharynx to the stomach, even if the individual is standing on their head.
    • Gall Bladder: a small organ that stores bile produced in the liver. It can hold about 50 mL of bile.
    • Ileum: the last region of the small intestine. The ileum follows the other small intestine regions known as the duodenum and the jejunum. After the ileum, digestive material must pass through the ileocecal valve to get to the cecum.
    • Jejunum: the middle section of the small intestine. It is preceded by the duodenum and followed by the ileum.
    • Liver: a vital organ that produces chemicals necessary for digestion. In digestion it is extremely important in producing bile, which helps break down fats.
    • Mouth: Often considered the first step in the digestive process. The chewing action of the mouth serves to mechanically break down food particles. Saliva produced here helps in chemical breakdown of food.
    • Pancreas: an organ that aids in both the digestive system and the endocrine system. It aids in the digestive system by producing pancreatic juices, which contain digestive enzymes, which pass through the small intestine. These juices help break down carbohydrates, protien and fat in the chyme.
    • Peristalsis: a radially symmetrical contraction of muscles that propagate down a tube. It occurs especially in the esophagus and the stomach. This movement helps the stomach mix up and break down our food.
    • Rectum: the last portion of the large intestine. Human rectums are about 12cm long.
    • Saliva:  a substance produced by the salivary glands that aids in digestion. Human saliva is about 98% water. The other 2% consists of electrolytes, mucus, and antibacterial compounds.
    • Salivary Glands: an exocrine gland that produces saliva, and amylase, among others.
    • Sigmoid Colon: a loop of the large intestine about 40 cm long. It is the closest part of the large intestine to the rectum and anus.
    • Stomach: a muscular organ in the gastrointestinal tract that helps churn up and digest food. The stomach lies between the esophagus and the small intestine. Smooth muscles in the stomach help to break down food mechanically via peristalsis.
    • Transverse Colon: the longest and most movable part of the colon. It is the section of the large intestine just after the ascending colon and just before the descending colon.

Links to other Digestive System Resources

As you may have gathered from the above information, the digestive system is a complex and intricate part of the body. A number of things can go wrong with this system and when they do illnesses can be severe and lower a person’s quality of life significantly. You can learn more about these health issues and digestive system diseases at MyMed.com.

Skeletal System

Overview

Our skeleton serves many important functions: it is the hard, structural framework that provides the shape and form for our bodies; it helps protect organs; and it works as point of attachment for our muscles. All of this allows our body to move. The skeleton is also important for storing minerals, and skeletal bone marrow produces red blood cells. When we are born we have around 270 bones, but as we grow older, some bones fuse together and eventually we end up with around 206. To help us explain this better, we made a short “bone basics” video.

The skeletal system is often divided into two parts: the axial skeleton and the appendicular skeleton.

Axial Skeleton

This skeleton consists of those bones that form the axis of the body.  They support the head, neck and core of the body. They include bones in the skull, sternum, ribs and vertebral column.

Appendicular Skeleton

This skeleton is made up of bones that anchor the appendages to the axial skeleton.  They include the bones in the upper and lower extremities, the shoulder girdle and the pelvic girdle.

Types of Bones

Bones are divided up into a few categories. Long bones are defined as bones with a body that is longer than the bone is wide. If we get asked to draw a bone in the skeleton, the long bones are usually the ones we think of. Short bones are about as wide as they are long. These are primarily found in the wrist of our hands and ankles of our feet (called the Carpal and Tarsal bones). They provide support and stability but do not allow for much movement. Then we have flat bones such as the shoulder blade, called the scapula. These are attachment points for several muscles and also provide good protection for our internal organs.

The fourth type of bone are called irregular bones. All the Vertebrae that make up our backbone are irregular. Their shape are just like the name implies–not very regular. The lower jaw bone is another example of an irregular bone.

What is Bone Tissue?

Bone tissue is in no way dead tissue. If that was the case we would be in serious trouble after a bone fracture. Bone tissue is continuously being replaced and rebuilt by bone-forming cells called osteoblasts and their counterparts the osteoclasts, cells that instead break down bone tissue. The outside of a bone is made up of compact bone tissue, also called cortical bone. It is smooth and solid with a low porosity. The bone tissue inside of the bones is very different. It is much more porous which gives space to a network of blood vessels and bone marrow. This spongy interior is referred to as cancellous or trabecular bone. Because of its porous nature it is much lighter than the cortical outside.

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Plant Growth Hormones

Hormones – Mighty Messengers!

Hormones get things done. Think of them as chemical messengers that are made in one place in the body and deliver their message in a totally different place in the body. And just like hot sauce, a little goes a long way. Hormones are usually found in very small concentrations, but boy to they pack a punch! We know hormones cause a lot of changes in humans (ah, puberty), but did you know that plants have hormones, too? Plants miss out on all the fun of body hair, acne, and voice changes, but read on to learn about the amazing effects that hormones have on plant growth and development!

The Big Five

We’ll cover five major types of plant hormones: auxin, gibberellin, cytokinin, ethylene, and abscisic acid. These hormones can work together or independently to influence plant growth.

AUXIN

You’ve seen auxin in action. Well you haven’t seen the actual auxin molecule itself with the naked eye, but you’ve seen what it can do to a plant grown near a window. Have you ever wondered how a plant bends towards sunlight? Well, it has to do with auxin in the stem. Darwin and his son were curious about it, too. (Published in: The Power and Movement in Plants) However, they didn’t know at the time what exactly was causing plants to bend toward the light. Auxin itself wasn’t discovered until the late 1920s, and it was the first of the 5 major types of plant hormones to be studied. Auxin has lots of jobs but most importantly it stimulates growth, and if a plant doesn’t naturally produce auxin itself, it will die. So you can see auxin is pretty important. The technical alias for auxin is indole-3-acetic acid or IAA (just incase you ever see it written is “IAA” – it means the same thing as “Auxin”).

phototropism - auxin

Auxin is involved in cell growth and cell expansion, so it is produced primarily in parts of the plant that are actively growing like the stem (specifically, the very tiptop of the stem). This is where it gets interesting. Auxin is transported (read: active process – requires energy) in one direction in a plant – downward from the top to the bottom, like a one-way road from the stem tip to the roots. It is the only plant hormone known to do this. Therefore the concentration of auxin is highest at the top of the plant and decreases as you get closer to the roots, this controls the overall shape of the plant and helps keep the primary stem of a plant the leader.

Have you ever seen the top of a single stem of tree that is pruned sprout into more than 20 new stems? That is because auxin maintains apical dominance it prevents lots of lateral buds and branches from growing on the side of the stem. When you prune the primary stem of a plant, the source of the auxin is removed, then no single stem is dominant anymore – apical dominance is removed.

Back to our bendy plant in the windowsill, remember how auxin is involved in making cells longer? Well auxin will move to the shaded side of the plant stem and cause those cells to grow longer, while the cells on the sunny side of the plant stay the same size. That will cause the plant to bend to one side – toward the sun!

GIBBERELLIN

Gibberellin causes some similar effects in plants as auxin, but it is a very different hormone. Gibberellins were discovered originally in Japan. A fungus called Gibberella fujikuroi infected rice plants and caused them to grow too tall and fall over. The infectious fungus produced a chemical that stimulated the growth in rice plants. The chemical was isolated and named Gibberellin after the fungus. It was later found that plants naturally produce variations of these chemicals!

Gibberellins play an important role in several developmental stages in plants, but their claim to fame is making stems longer. Gibberellins promote stem elongation between nodes on the stem. A node is a place on a stem where a leaf attaches, so gibberellins elongate the internodes. It is easiest to see the absence of gibberellin in dwarf plants and rosette plants – there is very little space between nodes on a stem and the leaves are clustered toward the base of the plant.

What’s the big deal about knowing how to control stem elongation in plants? Well, when would it be beneficial to know how to make a plant stem shorter or longer? Biologists can prevent plants in a greenhouse from making gibberellins to keep them a manageable size. That’s handy. Or what if you’re a farmer and your business is something that comes from the stem of a plant? Longer stems would mean more profit for you, right? Gibberellins sprayed on sugar cane in Hawaii elongate the stem between the nodes. Longer stems mean more stored sugar. More sugar to sell means more coin! Knowing about plant hormones just makes cents!

CYTOKININ

Who knew that fish could play a role in the discovery of a plant hormone? Aged herring sperm DNA can promote cell division. The molecule that is responsible for this was named kinetin. Soon after, a substance that had the same biological effect as kinetin was found in plants, it stimulated plant cells to divide when in culture with auxin. The substance was named cytokinin and it is involved in cell division and in the making of new plant organs, like a root or a shoot. Cytokinins are produced in the root apical meristems (very tip of the roots) and travel upward hitching a ride with water and traveling up the stem through the xylem. The movement of cytokinins is passive – it does not require energy!

Cytokinins are like the fountain of youth in plants. They delay senescence or the natural aging process that leads to death in plants. In the cell cycle, cytokinins promote the movement from the G2 phase to the M phase. In other words, they encourage cells to divide!

Cytokinins are involved in repair, too. If a plant becomes wounded, it can fix itself with the help of cytokinins and auxin. Remember how some hormones work together to affect plants? Well if the concentration of auxin and cytokinin are equal, then normal cell division will take place. If the concentration of auxin is greater than cytokinin then roots will form. If the concentration of auxin is less than cytokinin then shoots will form.

ETHYLENE

Have you ever noticed that if you put a really ripe, brown banana right next to a bunch of green bananas, the unripe bananas will ripen and turn yellow much faster? How does that happen? Well, the brown banana is communicating with the green bananas using a hormone called ethylene. Ethylene is a plant hormone that affects ripening and rotting in plants. It is a particularly interesting plant hormone because it exists as a gas. No other plant hormone is gaseous! Ethylene can be produced in almost any part of a plant, and can diffuse through the plant’s tissue, outside the plant, and travel through the air to affect a totally different plant. How cool is that!

Here’s how it was discovered. Tomato farmers noticed something weird happening with their crops. Back in the day many farmers used kerosene heaters in their greenhouses to warm the air so that they could grow tomatoes during the winter. With the advent of electricity, some farmers switched to new, fancy electric heaters, but they soon found that their tomatoes were not ready to be picked at the same time the way they were when the greenhouses were warmed with kerosene heaters. The burning of the kerosene in the heaters produced a molecule similar to ethylene that synchronized the ripening of the tomatoes!

The formation of ethylene requires oxygen, and the agricultural industry has used this tidbit of information to their advantage. If you control the partial pressure of oxygen and carbon dioxide in a truck carrying produce (specifically low O2 high CO2) you can prevent ethylene synthesis and thus slow the ripening process. This is helpful when fruits and vegetables are grown in one region of the world and then shipped many miles away to be sold. Growers don’t want their produce to go bad before you even have a chance to buy it!

ABSCISIC ACID

When our bodies need water we feel thirsty. The “thirst signal” signifies that we’re dehydrated and we need a drink of water. When a plant needs water, for example during a drought, it doesn’t have too many options. A rain dance is pretty much out of the question. Plants produce a chemical messenger, called abscisic acid, to alert the rest of the plant that it is water stressed. Abscisic acid is made in droughted leaves, droughted roots, and developing seeds and it can travel both up and down in a plant stem in the xylem or phloem sounding the alarm.

Think back to transport in plants, how does water typically move through a plant? (Reminder: soil -> roots -> stem -> leaves -> air) Water molecules exit a plant through tiny pores in the leaves called stomata. Each stoma (singular) has two kidney bean shaped bodyguards on either side of the pore, whose job it is to open and close the stoma. When the guard cells are full of water, or turgid, the stoma is open. When water leaves the guard cells, they become flaccid, and the stoma is closed.

Now imagine you’re a thirsty plant. It hasn’t rained in weeks and there is no moisture in the soil around your roots. You’re running dangerously low on water. What can you do to prevent yourself from losing any more precious H2O? Close the stomata! How do plants do it? Abscisic acid travels to the guard cells, sending a message that water is scarce. The guard cells spring to attention, and a rush of charged particles exit the guard cells, which subsequently triggers water inside the guard cell to leave, too. The guard cells shrivel and the stomata close! No more water is able to exit the plant through the stomata.

That’s a brief overview on the five major types of plant hormones: auxin, gibberellin, cytokinin, ethylene, and abscisic acid. Remember that hormones are potent little chemical messengers, but they would lose their effectiveness if they hung around and built up in the tissues of the plant. So they are broken down and replaced over time.

There is so much more to learn about plant hormones! A great textbook for those who want all the wonderful nitty-gritty details is Plant Physiology by Taiz and Zeiger.

Plant Hormones Effect Spring!

It’s finally starting to heat up again after winter in the northern hemisphere. Spring is in the air and everyone and everything is getting ready for it. Trees that dropped their leaves are breaking out in bloom with new shoots and flowers. We know the leaves are going to come back when spring comes, and we simply take it for granted, but let’s take a quick look at what really is going on.

Transport in Plants

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TRANSPORT- GET MOVIN’

Transport is the movement of things from one place to other. It happens all the time. For example, you might transport the stinky bag of trash in your kitchen to the curb for garbage pickup. Or you might be transported from the bus stop to school or work. Transport happens inside our bodies, too. Our heart is connected to a superhighway network of veins and blood vessels that make up our circulatory system, which is responsible for transporting nutrients from the burger you ate throughout your body from your nose to your toes.

TRANSPORT IN PLANTS?

What about transport in plants, how does a Redwood, one of the tallest trees in the world, move water from the soil to the needles on its tallest branches over 300 ft in the air? (That’s over 30 stories high!) Or how does a carrot transport the sugars made in its green, leafy tops below the surface of the soil to grow a sweet, orange taproot? Well, certain types of plants (vascular plants) have a system for transporting water, minerals, and nutrients (food!) throughout their bodies; it’s called the vascular system. Think of it as the plant’s plumbing, which is made up of cells that are stacked on top of one another to form long tubes from the tip of the root to the top of the plant. To learn more about it, let’s study the stem.

STEM OVERVIEW

Ah, the stem, the part of the plant that connects the leaves to the roots! But, not all stems are similar! For example, cactus stems are swollen and store water. Some stems twist and have grasping tendrils like the pea plants growing up a garden trellis or lianas in the tropics.

Transport-combined

Other stems are covered in thorns, providing lyrical inspiration for 80s power ballads and making the stem less palatable to herbivores. Stems give a plant structural support so they can grow upright and position their built in solar panels (leaves) towards the sun, but stems are also flexible allowing them to bend in the wind and not snap. Despite the shape or modification, inside every stem of a vascular plant is a bundle of tubes, and this my friends is where transport happens in the plant.

STEM VISUALIZATION

To understand transport in plants, let’s start with a little stem anatomy. Imagine that you’re holding a handful of drinking straws and chopsticks with a rubber band around them.

SONY DSC

This bundle is your imaginary plant stem.

The rubber band, the drinking straws, and the chopsticks represent the three types of tissues found in vascular plant stems. The rubber band symbolizes the dermal tissue that covers the outside of the plant stem, and like our skin it acts as a protective layer. Ideally the rubber band would completely cover your makeshift stem bundle, so you’ll just have to use your imagination. The chopsticks fill in the space between the rubber band and the drinking straws and represent what is called ground tissue. Ground tissue is made up of cells that provide structural support to the stem. The drinking straws represent the third tissue type, the vascular tissue. Depending on the type of plant, the drinking straws might be arranged in the stem in a very organized way or scattered throughout haphazardly. Regardless of their arrangement each straw has a job to do; either transport water and minerals or transport sugars.

XYLEM: DRINK UP!

In our example, the straws that transport water and minerals up from the roots to the leaves are called xylem (zy-lem). Now imagine that each straw is actually a certain type of cell stacked one on top of the other creating a tube. Depending on the type of plant, xylem tissue can be made up of one or two different types of cells. Plants like ferns and conifers have xylem “straws” that are made of slender cells called tracheids. At maturity these cells die, leaving behind a rigid cell wall scaffolding tube to conduct water and minerals. Flowering plants have an additional type of xylem tissue called a vessel element. Like tracheids, vessel elements are dead at maturity, but unlike tracheids, vessel elements are much wider – more like a smoothie straw! This means that they can transport more water at a faster rate. Just think of how much faster you can slurp a soda with a wider straw! Just because vessel elements are wider, doesn’t necessarily mean that they’re better. Vessel elements are prone to getting little air bubbles caught in them, and once an air pocket occurs, the party is over and it is very difficult to move water up the stem.

PHLOEM: IT’S ALIVE!

Back to our imaginary plant stem, the remaining straws transport food made in the leaves to the rest of the plant and are called phloem (flo-um). Phloem tissue is also made up of two types of cells that are less rigid and much more lively than their water carrying compatriots (no really, they don’t die at maturity like xylem cells do). One cell type does the heavy phlo-ing, while the other is the wingman. Here’s how it works: sieve tube elements are masters of flow. They stack one on top of the other separated by perforated plates creating the tube-like structure we’re familiar with. Sieve tube elements clear almost everything out of their cells that could slow the flow including organelles and even their nucleus! Anything that’s leftover gets squeezed up against the cell wall like pushing all the chairs to the side of a room so you can break dance in the middle. The sieve tube elements are busy, but they couldn’t do it alone. Directly connected to the sieve tube elements through holes in their cell walls are their faithful buddies the companion cells. These cells have all the necessary cellular machinery to keep themselves and their adjacent sieve tube element alive and kickin’. And while companion cells don’t conduct food along the stem of the plant, they do play an integral role in loading food into and out of the sieve tube elements.

PRIMARY AND SECONDARY GROWTH: IT TAKES TWO TO TANGO

But don’t forget, plant stems can grow in two directions. Our imaginary plant stem helps us to visualize what the inner workings of a soft, green herbaceous stem – similar to what a dandelion stem might look like.

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The dandelion stem will grow in length until it’s taller than the grass around it in your lawn – making it an easy target for the lawnmower. We call the increase in stem length primary growth. How does a stem actually get longer? Do the individual cells along the stem just keep getting bigger and bigger? Nope! (But individual cells and their cell walls will elongate to a certain size.) Primary growth originates in the apical meristems or places of rapid cell division, which are located at the top of the growing plant and at the tips of the roots. New cells are made in the apical meristems, so plant length increases by adding these new cells to the end of the stem, just like if you were using wooden blocks to build a tower. Each block you add to the top increases the height of the structure.

But what about stem growth in a tree? How does the trunk of a tree grow to be so much thicker than a dandelion stem? A tree seedling stem will start off green and flexible but over time, the tree will grow larger, become woody, more massive, and will need structural support to keep itself from falling over. The tree does this by increasing the width of the stem, which is called secondary growth.

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Stems get wider at two places: the vascular cambium and the cork cambium. The vascular and cork cambium are also places in the stem where cells are dividing rapidly – the difference is where they are located. Cork cambium is a circular band of dividing cells found just beneath the outer covering of the stem. Its job is to make cork, or the outer most layer of bark that you see on trees. The vascular cambium is also a circular band of dividing cells, but it is located deeper into the stem between the two types of vascular tissue we talked about earlier: xylem and the phloem. The vascular cambium is a jack-of-all-trades. Cells in the vascular cambium divide and if the new cells are located toward the outside of the stem they become phloem, and if they are located toward the inside of the stem the cells become xylem. The vascular cambium will continue to divide creating new layers of cells in two different directions on either side of itself, and over time the stem will become thicker.

WATER AND NUTRIENT TRANSPORT: WHAT MOVES YOU?

So now we know what parts of the stem are responsible for transporting water (xylem) and nutrients (phloem), but we don’t know yet how they move or what drives their movement. Keep in mind that one requires energy and one does not.

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Let’s start with water. The movement of water in a plant is like a one-way street, it is unidirectional and it travels along this route: soil -> roots -> stem -> leaves -> air. The movement of water throughout a plant is driven by the loss of water through it’s leaves, or transpiration. The water molecules that move through the xylem are connected in a continuous “stream”. They are able to do this because 1) water molecules really like each other (a property called cohesion) and 2) they also like to stick to other substances (a property called adhesion), and these two properties allow water to move up the xylem “straw” we visualized earlier. As water evaporates into the atmosphere from the surface of the leaf, it “tugs” the adjacent water molecules inside the leaf, which “tugs” on the water molecules in the stem, which “tugs” the water molecules from the roots, which “tugs” water molecules into the roots from the soil. So water evaporating from the leaf initiates the “tug” or pull of water through the stem. But, the important thing to remember is that this movement of water is passive, meaning that it doesn’t require any energy to transport water through the plant.

Now let’s move onto the sweet stuff, phloem. The movement of sugars in a plant is much different than the movement of water. First of all, phloem can move both up and down a plant, which comes in handy when a plant needs energy down below to grow new roots, or when a tasty apple is developing on a high branch. The sugars are made in the leaves as a product of photosynthesis. To get the food made in the leaves to other parts of the growing plant requires energy. So, with the help of some water from the xylem, sugars are actively loaded into the phloem where the sugars were made (which is called the source) and actively offload where they are needed (which is called the sink). Ever seen a dumb waiter in an older home? Phloem loading and unloading works sort of the same way. Someone in the kitchen can open the door and put a plate of food inside the mini elevator, then with the help of some energy and a pulley system, the tray of food is taken up the elevator shaft to another floor where someone opens the door and retrieves it. In plants the movement of nutrients through the phloem is driven by where the sugar is most needed for the growth of the plant.

Plant Diversity

Land plants are amazingly diverse and adaptable, but they owe their leap out of the pond as it were to some hereditary assistance 400 mya from their closest living relatives, green algae. Think for a moment about the transition that land plants underwent, from an ancestral state of growing either partially or completely submerged under water to growing on land, surrounded not by water, but… air! It was a gamble, because it can be a tough, dry, desiccating world out there, but it paid off and plants thrive in incredibly diverse environments all over Earth.

Before we dive into plant diversity, let’s first take a little trip down memory lane of Earth’s evolutionary past. To understand the evolutionary relationships of a group of organisms, biologists construct a phylogeny. It’s kind of like a family tree, except instead of focusing only on a few generations; it zooms way out and looks at relationships over evolutionary time. It’s helpful to know which organisms arrived on the scene early (ancestral types) and which ones arrived later (descendants). Once biologists figure out ancestor/descendent relationships, they build a phylogenetic tree using different types of information such as the structure and shape of the plant (morphologic data) and DNA sequences of certain genes (molecular data). Plants are organized onto the phylogenetic tree based on similarities and differences in these data.

Land plants had to undergo exciting structural and reproductive changes to adapt from an aquatic to terrestrial lifestyle. Considering their vast diversity, all land plants have at least one very important characteristic in common – they undergo a unique life cycle that is referred to as an Alternation of Generations. This means that the life cycle of any land plant has two distinct phases. The amount of time spent in each phase varies depending on the group to which the plant belongs.

The first phase is called the gametophyte generation (phyte=plant, gameto=gamete). In this phase, we are referring to a plant (multicellular, not just a single cell) that has a single set of chromosomes (haploid) that produces gametes (egg and sperm cells) that are also haploid. Here’s the really interesting part, the egg and sperm cells are produced via mitosis, cell division resulting in two cells that are identical to the original cell.

For those of us more familiar with our own lifecycle than that of plants, the “egg and sperm cells produced via mitosis” part of the gametophyte generation description should sound some bells and whistles in your mind as a major difference to the way human produce their own egg and sperm cells. Our gametes are produced through meiosis or the division of a single cell into four cells that have half the genetic information of the original cell.

The second phase is called the sporophyte generation (again phyte=plant, sporo=spore). In this phase, we are referring to a plant (multicellular, not just a single cell) that has two sets of chromosomes (diploid), which is the result of the fusion of two gametes (sperm and egg). In the most basic sense, we’re talking about a plant that produces spores. More specifically, the diploid sporophyte produces haploid spores. How do they do it? Well, there’s only one type of cell division where the overall chromosome number is reduced during division and that’s meiosis. So the sporophyte undergoes meiosis to produce haploid spores.

Now that we understand the nuts and bolts of Alternation of Generations, let’s begin our tour through land plant diversity and see how this lifecycle plays out in each group.

BRYOPHYTES

The first group that emerged after green algae was the nonvascular plants or bryophytes. Remember that the vascular system is the “plumbing” that plants use to transport water, minerals, and nutrients. Vascular tissue is broken up into two types: xylem transports water and minerals, while phloem transports nutrients. Therefore nonvascular plants like mosses, liverworts, and hornworts do not have xylem or phloem, which also means they don’t have true roots, stems, or leaves. Some have rhizoids which might look like little roots, but they serve to anchor the plant. Rhizoids are not absorptive.

Without a well-defined system to transport water throughout their bodies, where would you guess that these types of plants are found? And if you had never seen a bryophyte before, but you knew it had no vascular system, would you suspect the plant to be tall or have a low stature? Bryophytes and mosses are found in moist environments, and they are typically low to the ground, because they lack stems or a vascular system to transport water.

There are several key innovations that our buddies the bryophytes had to undergo to make the evolutionary leap from an aquatic to terrestrial environment. Two structural changes allowed these plants to survive in a dry, terrestrial atmosphere. First, bryophytes developed cuticles, different from the layer of skin at the base of our fingernails and toenails. A plant cuticle is a waxy layer that covers the plant that keeps water in and keeps the plant from drying out. Second, bryophytes developed stomata, which are pores in the cuticle that allow gas exchange. Sure, plants release oxygen, but they also need to take in carbon dioxide for respiration, so pores are critical for gas exchange to take place.

The last key innovation for bryophytes is a reproductive adaptation. Remember, that in bryophytes the gametophyte generation is dominant. Being that this plant is a gamete producing plant, they do it with style. Bryophytes developed gametangia or specialized gamete-forming structures. There are two types: the male, sperm producing structure (antheridium) and the female, egg producing structure (archegonium). Bryophytes, for all the strides they made to adapt to living on land, have a carryover from their aquatic ancestry – they still need water for reproduction. Sperm released from the antheridium will swim to the archegonium to fertilize the egg. The developing zygote actually grows up out of the gametophyte into the spore-producing generation (sporophyte). It’s kinda like lipstick coming out of it’s tube . The diploid sporophyte is totally dependent upon the gametophyte for survival. Lipstick can’t survive without its case.

SEEDLESS VASCULAR

The key innovation for this next group, and for all plants from this point forward in our survey of plant diversity, is vascular tissue: xylem to transport water and minerals, and phloem to transport sugar. Vascular plants have true leaves, stems, and roots. Vascular plants also have a special substance called lignin which is a compound in the cell walls of plants that gives them additional strength and stability. Considering the plumbing and structural advantages vascular plants have, it’s no wonder that they are, in general, much larger plants than bryophytes.

The seedless vascular plants include club mosses, whisk ferns, horsetails, and ferns. Some of the plants in this group still need water for fertilization. Unlike the bryophytes, the sporophyte generation is dominant. The gamete-producing plant, or gametophyte generation is free-living but very small.

SEED PLANTS

The key innovation for the remaining plants is the development of seeds. This may sound simple, but the development of seeds was a major adaptation in the evolution of plants. Seeds are hearty, and most importantly, they can endure dry conditions. The adaptation of the seed meant that plants were free from their dependency on water for reproduction, and consequently they could colonize drier environments.

Here’s a little insight into “the seed”. It’s a pretty remarkable adaptation that wouldn’t be possible without the evolution of a characteristic in seed plants known as heterospory. Basically this means the production of two distinct types of spore producing structures, and therefore two distinct types of spores: microspores and megaspores. The microspores develop into pollen, or the male gametophyte. The megaspore develops into the egg, or the female gametophyte. The egg and sperm fuse to form a zygote that develops into an embryo, which is protected inside several layers and wrapped in a protective coat. The whole package is the seed!

We group the seed plants into two major groups: gymnosperms and angiosperms. The exciting aspect of these two groups is that the sporophyte is dominant and the gametophyte is so reduced that it is dependent upon the sporophyte for survival. The sperm and egg develop within the sporophyte, and the female gametophyte is retained within the tissues of the sporophyte. There are three main types of gymnosperms: cycads, ginko, and conifers. Gymnosperms all rely on wind for pollination. Wind can be a finicky thing, and not always the most reliable, especially when something as important as ensuring viable offspring (fertilization and the production of seeds) is at stake! Our next group really upped their pollination strategy with a couple fabulous innovations.

ANGIOSPERMS

Angiosperms are an incredibly successful group, radiating all over the globe. There are two secrets to angiosperm success: flowers and fruit. Aside from attracting people (floral industry rakes in billions of dollars a year!) flowers also serve the role of attracting pollinators. This is an advantage over gymnosperms that rely upon a gust of wind to transport their pollen!

Another key innovation of angiosperms is fruit. Fruits are sweet, delicious, and hidden inside of them is all the genetic material for the next generation of plant – the seed! It was very clever marketing to package such precious cargo in an outer covering that is soft, fleshy, sweet, and nearly irresistible to animals.

So as you can see, plants had to undergo a bunch of structural and reproductive changes to adapt from an aquatic to terrestrial lifestyle. But keep in mind the overarching trend in plant diversity – a shift from gametophyte dominant plants in the byrophytes, to an evolutionary intermediary step where the sporophyte dominant generation is dominant and the gameophyte generation is independent, to seeds plants where the gametophyte generation is so reduced that it is dependent upon the sporophyte for survival.

Monocots vs Dicots Explained

Do you remember learning the difference between monocots and dicots in school? Do you even remember why that’s important? First, understand that monocots and dicots actually represent the two main branches of flowering plants. That means that almost all flowering plants can be divided into one of these two groups. Of course, the key word is almost. There are some that don’t fit into either group all that well. Start by watching our video short on the differences between the two groups.

The five main characters I like to use are Leaves, Roots, Stems, Cotyledons, and Flowers.

Flowers

Monocots tend to have flower parts in multiples of 3.

Dicots tend to have flower parts in multiples of 4 or 5.

Leaves

Monocots tend to have parallel veination.

Dicots tend to have net veination.

Roots

Monocots usually have adventitious roots.

Dicots usually have tap roots.

Stems

The vascular bundles of monocots are usually spread throughout the cross-section of the stem.

Those in dicots are usually spread to the outside.

Cotyledons

In theory, this is the best way to tell the difference between monocots and dicots. Monocotyledons, have one cotyledon and dicotyledons have two. However, unless you’re a botanist, it’s going to be somewhat difficult to look at a seed to determine the number of these.

More Great Resources to Read about Monocots vs Dicots

Monocots vs Dicots: A quick overview from Berkley.

Why leaves change color

Every fall in the deciduous forests of the world, there is a miraculous change in the color of the leaves. They turn from green into brilliant shades of yellow, orange, red, and purple. Sometimes you can see several shades on the same leaf. But why are these color changes happening, and what is going on in the plant?

Fortunately, that’s the topic of this Untamed Science video. Rob explains, with the help of Canopy Biologist, Meg Lowman, that it has everything to do with the pigments in the leaves. In fact, many of those pigments have been there all year and can only now be seen. Others, like the red color are a result of pigments produced in the plant as it dies.

If our video didn’t answer all your questions, read more below about exactly what’s happening in the plant.

The Four Pigments Responsible for Leaf Change

The changing leaf colors you witness each year boil down to a few chemicals in the leaves. Some are pigments, some are by-products produced by the leaf, and other are produced only in the fall. Here are the culprits:

  • Chlorophyll
  • Carotenoids
  • Anthocyanins
  • Tannins

Chlorophyll

The leaves of plants are responsible for absorbing light from the sun to convert it into energy for the plant. While we mostly learn about chlorophyll, there are also other pigments, like the carotinoids we discuss later.

Chlorophyll is green because of the way it absorbs light; the pigment absorbs the blue and yellow wavelengths but not the green. The green is reflected back.

Carotenoids

Carotenoids are responsible for the orange you see in carrots and are displayed brilliantly in aspens, maples, and birches.

This is a family of pigments that are almost always present in the leaves. However, they’re rarely in higher quantities than chlorophyll and are thus masked. However, as fall rolls around and the chlorophyll breaks down (and doesn’t get replaced in the leaves), the yellow colors start to appear. We’re finally able to see the colors that were hidden before!

Anthocyanins

Anthocyanins produce the reds and purples that we see in maples, sumacs and dogwoods. Turns out, most anthocyanins are not found in the leaves most of the year. They’re produced in the fall from a reaction with anthocyanidins. While it’s dependent on pH, acidic soils can produce bright red colors.

Tannins

Tannins are waste products, produced in the plants, and often give them a bitter taste. The taste and color of tea for instance has a large part to do with tannins in the tea. The brown color of the water in the amazon, has a lot to do with

Tornado Damage Levels Conservation in the Deep Sea Accelerometer Research with Nick Whitney - Sharks Why is the Ocean Blue

Boreal Forests

The Taiga

The mysterious forests and treacherous quagmires of the far northern latitudes have inspired storytellers for centuries. The Nordic fables that we read as bedtime stories paint a vivid picture of the northern boreal forests. These are the kind of forests where a lost traveler could lay down on a thick bed of moss only to wake up and find himself surrounded by curious gnomes; where trolls guard bridges; where marsh-men are known to drag you into peat bogs and never let you go…

It’s no wonder people respected these forests and feared the creatures that may have lay in the shadows. Large mammals like moose, bears and wolves are commonly found here, and many people actually do get sucked into the bogs and marshes. Beyond these dangers, the forest itself is often dark and mysterious. Thick stands of Fir and Spruce trees create a canopy that blocks most of the sunlight, making it dark and difficult to navigate. Green and black lichens drape themselves from the tall trees like hag’s hair, playing tricks on your eyes, causing you to think very seriously about the existence of wood-goblins…

Wild fantasies and overactive imaginations aside, the boreal forest is the largest terrestrial biome on the planet, with much of it still undisturbed and unaltered by human beings. The bogs and marshes contain plant species with amazing adaptations for survival, and the forest can be truly enchanting, despite the lack of gingerbread-house-dwelling witches.

Where can we find them?

Boreal forests are only found in the northern hemisphere of Earth, mainly between latitudes 50° and 60° N. With short, cool summers and long, cold winters, these forests form an almost contiguous belt around the Earth, sandwiched between temperate deciduous forests to the south and tundra to the north.

Due to the short growing season in these regions, deciduous trees don’t have enough time to regrow their leaves, and very few of them are able to survive. Instead, coniferous trees dominate because they don’t have to regrow their leaves and are better adapted for a colder climate. South of the boreal forest, the growing season is longer, warmer, and better suited for deciduous trees, so temperate deciduous forests dominate. North of the boreal forest, temperatures stay cold enough to keep any trees from growing, and we call this region the tundra. Essentially, boreal forests occur in a “Goldilocks” zone, where temperatures are too cold for temperate forests and too warm to be considered tundra.

Abiotic Factors: Climate

As we have said, boreal forests are characterized by having a very short growing season in which plants only have about 50-100 frost-free days to grow. In these regions, winters can last over 6 months, with average temperatures generally staying around -20° C (-4° F). Summers are short and stay at about 50° F, but can get as high as 80° F in some areas. Precipitation rates are low (~15-20 inches annually) and fall mostly during the summer months. But in these regions, moisture tends to stick around for longer periods of time due to low temperatures and evaporation rates. Therefore, even though these regions receive as little precipitation as some deserts, they remain moist for most of the growing season!

This peculiar, dry-but-moist climate is mainly influenced by the interaction of two air masses during the summer and winter. You can think of “air masses” as big bubbles in the atmosphere that move air and water from one region of the world to another. Those big bubbles of air retain the same temperature and moisture levels as the region where they were “made” and essentially transport weather. For example, air masses that were created in arctic regions tend to be cold (for obvious reasons) and dry, because water does not evaporate into the air as much in the Arctic. So, when the arctic air mass moves to another region, it brings cold, dry weather with it. During the summer in the boreal forest, warm, moist air from the Pacific air mass moves north, bringing warm weather and rain. During the winter, cold, dry air from the Arctic air mass pushes south, into the boreal forest, causing the cold, dry winters.

Snowy Boreal Forest 
Interestingly, when temperatures start to drop in the fall, the snow that falls on the taiga actually helps to keep it warm! The thick snow drifts that accumulate in the forest insulate the ground below them like a thermos, allowing the soil temperatures to stay above freezing, while the air above them is well below it.

Abiotic Factors: Soil

One of the most important abiotic factors in any forest ecosystem is the condition of the soil. Factors like nutrient levels, moisture content, and decomposition rates determine what plants are able to grow there. The boreal forest soils are what soil scientists call spodosols and are considered to be very hostile soil conditions. The word “spodosol” comes from a Russian word meaning “under ash” and refers to a layer of gray, nutrient-poor soil beneath a thin layer of organic material. In soils like this, water leaches through the upper layer of sandy soil quickly, dragging almost all available nutrients with it. Then, the decomposed material (organic nutrients) and fine grained quartz (sand and clay) that leached through the soil are broken down and chemically altered to form a layer of gray, nutrient-poor clay.

Not only is the soil lacking vital nutrients for plant growth, but coniferous trees poison it to keep other plants from sprouting! The needles from coniferous trees in these forests contain a high concentration of resins, oils and other chemicals that can help prevent them from freezing solid in the winter. When they fall off the tree, though, all of those chemicals leach into the soil, making it very acidic and often toxic to other plants.

Finally, remember that evaporation does not happen very quickly in a boreal forest. The little precipitation that does fall in these forests accumulates in the soil, decreasing the amount of available oxygen and slowing the rate of decomposition. Put it all together and you get a poisonous, acidic soil that leaches the few nutrients it has available for plants to grow; harsh conditions indeed!

What do they look like?

Types of Taiga: Light and Dark

Like fine chocolate, boreal forests come in two flavors: light and dark. The dark taiga is commonly found in the southern range, where the climate and soil conditions are more favorable for plants and thick stands of Spruce and Hemlock create a closed canopy. The light taiga is found more often in regions where the soil is too nutrient-poor to support as many trees. In these areas, Pines and Larches are spread further apart and create an open canopy.

Boreal forest drawing with nordic house

Oddly enough, the dark, dank, spooky forests described in Nordic fairy tales are actually more supportive of life than the bright, open pine forests of the light taiga. While both versions of the boreal forest have low biological diversity, the soils of the dark taiga tend to be more nutrient-rich and thus more supportive of plant life. In areas where light can penetrate the canopy, the herbaceous layer of the forest can be downright lush; filled with ferns, Fireweed, Shrub Alders, raspberries, salmonberries, blueberries, black currant, red currant… (It’s no wonder the bear poop here is filled with fruit seeds!) On the other hand, the light taiga has drier, more infertile soil and a more open understory.

Why are Boreal Forests so Coniferous?!

Conifers like Pine, Fir, Larch, Spruce, and Hemlock are are well adapted for harsh conditions and are the dominant trees species in the boreal forest. As opposed to deciduous trees, which lose their leaves as soon as it gets cold, conifers retain their needles throughout the winter. The dark green needles help to absorb heat and allow them to begin photosynthesis as soon as temperatures rise above freezing. Needles also help to prevent water loss because the stomatal openings (pores that exchange gas and water) are positioned on the underside of the needle, underneath a waxy cuticle.

In the winter, when heavy snowfall accumulates, their conical shape helps to shed snow and prevents branches from breaking off. To combat temperatures well below freezing, conifers produce resins and other chemicals that act like antifreeze and keep the tree from freezing solid in the winter. When the needles fall off the tree, the chemicals that helped them resist freezing leach into the soil. This helps the tree outcompete other plants by creating a toxic environment in the soil, an adaptation called allelopathy.

Other Plant Adaptations

While conifers are the dominant tree species, some deciduous trees have found a foothold in the boreal forest, despite the cold, infertile conditions. Trees and shrubs of the genus Alnus (Alder) have bacteria-filled nodules in their roots which help to convert atmospheric nitrogen into useable nutrients, feeding not only themselves but the plants around them as well. Other deciduous trees like Willow and Aspen require a large amount of water to grow and can be found where soil moisture levels are too high for conifers.

Other plants have found ways to get the nutrients they need without having to gather much from the infertile soil. Sun Dew and Pitcher Plants are carnivorous plants that you may spot in the bogs and fens of the taiga. These plants get nutrients by trapping and digesting insects and other arthropods.

Ancient History and Succession

Given Earth’s loooong geologic history, our boreal forests are relative newcomers to the world biome scene. This is not to say coniferous forests like this haven’t existed before. They have. Just not where you would expect them to be. This is because throughout Earth’s climatic history, temperatures have fluctuated regularly, and glaciers have expanded and retracted over enormous distances. Approximately 20,000 years ago, when ice sheets were at their last glacial maximum, tundra and permafrost covered much of what is now boreal forest, and coniferous forests grew where we now see temperate deciduous forests. As the glaciers retreated, they literally paved the way for modern boreal forests.

Glaciers, Lakes, and Bogs

As the glaciers retreated north, they scraped and gouged the Earth below them, leaving behind vast expanses of tundra and landscapes pockmarked with deep depressions. The tundra eventually gave way to coniferous forests when the temperatures were right, and the depressions filled with water, forming thousands and thousands of glacial lakes. In the northern latitudes, a unique moss called sphagnum moss helped to drastically change the landscape.



Sphagnum moss is crazy awesome, y’all. It is most often found along the edges of lakes and bogs, where it absorbs an unbelievable amount of water. (One ounce of dry sphagnum can hold almost a pound of water!) As more and more sphagnum builds up around the lake, some of it dies and begins to decompose. Remember that decomposition is a slow process in the Boreal forest, due to acidic and oxygen-poor conditions. When sphagnum decomposes under these conditions it turns into peat, a rich organic sediment, which accumulates around the lake’s edges and fills in from below. When enough sphagnum moss and peat have displaced the water in a lake, it can be called a bog. When the peat layers displace all of the water in the bog, trees are able to take root, and eventually, boreal forest takes the place of the bog. The eventual succession from bog to forest can take a very long time because the soil conditions in a bog are even more acidic and oxygen-starved than the boreal forest. Due to the extreme acidity and low oxygen conditions in a bog, they usually host a very unique set of plants which are adapted to the most extreme conditions. Cranberries, lingonberries, and dwarf blueberries are small, tart berries that do well in these conditions, and can be a sweet treat for a bog-traveler, if they don’t get pulled down by subterranean marsh kings first!

Actually, marsh kings don’t really exist (as far as we know), but bogs can be dangerous places to wander if you aren’t careful. The real reason is the peat layers at the bottom of a bog can be deceptively deep. If you stepped in an area where the peat was not fully compact, you could end up sinking up to your waist, or deeper, and be unable to climb out.

Common Disturbances

Boreal forests are not as long lived as many old-growth deciduous forests. While many stands of boreal forest can reach a mature age, frequent disturbances often keep the forest from reaching late successional stages. Insects are one of the most common disturbances that keep these forests from getting too old. In North America, for example, Spruce Bark Beetles are responsible for killing millions of mature Spruce trees every year. The beetles dig their way in between the bark and wood of the tree, eating away the cambium layer. Eventually, the tree is unable to transport its nutrients and it dies. While the beetle attacks both young and old trees, young trees are able to defend themselves more readily than mature trees, and are less affected by beetle infestations. While beetle infestations are a natural component of the boreal forest, global climate change has allowed them to speed up their life cycle, and damage from beetle attacks has escalated as a result.

Fire is another common disturbance in the dry areas of a boreal forest. In this case, mature trees normally survive the blaze, but young trees and ground cover burn quickly, recycling their nutrients back into the soil. Working in tandem, these disturbances keep the forest young and healthy.

Find out more at The Wild Classroom!

Musculatory System

Muscles are the tissues that allow our bodies to move! The more you know about how your muscles work, the better you’ll be able to apply it to your life – such as lifting weights. To get you started, we created this short basics video.

There are three different types of muscle: cardiac, smooth, and skeletal. Each is responsible for a different function.

Cardiac Muscle

Cardiac muscle is striated and can produce impulses and contract spontaneously. Heart cells, or myocardial cells, are short, branched, and interconnected. Each myocardial cell is joined to adjacent myocardial cells by gap junctions, which are electrical synapses. Since all the cells in a myocardium (a mass of myocardial cells) are electrically connected, a myocardium acts as a single functional unit. This means that a myocardium contracts to its full potential each time because all of its cells contribute to the contraction.

Smooth Muscle

Smooth muscle is found in the walls of blood vessels and bronchioles, the digestive tract, the ureters, the ductus deferentia, and the uterine tubes. Smooth muscle is not striated (meaning it does not contain sarcomeres). This is because smooth muscle cells are required to contract even when greatly stretched, such as in the urinary bladder.

Now that we’re familiar with cardiac and smooth muscle, let’s focus primarily on skeletal muscle.

Skeletal Muscle

Skeletal muscle is a biological machine with the primary function of converting chemical energy (stored in the bonds of ATP) into mechanical work. Skeletal muscles are usually attached to bones via tendons. When a muscle contracts, tension is placed upon the tendons and the attached bones. This tension causes movement of the bones at a joint. Skeletal muscle is also a great source of heat, a dynamic metabolic store, and a source of protective padding.

Composition

When viewed under a microscope, muscle fibers appear to be striated. These striations are produced by alternating dark and light bands that span the width of the muscle fiber. The dark bands are called A bands, and the light bands are called I bands. The A bands are composed of thick filaments, and the I bands are composed of thin filaments. When muscle fibers are viewed at a high magnification through an electron microscope, thin dark lines can be seen in the middle of the I bands. These are called Z lines (or Z discs). The arrangement of thick and thin filaments between a pair of Z lines forms a repeating pattern that is the basic subunit of striated muscle. These subunits are called sarcomeres.

Muscle Contraction

Muscle is 75% water and 20% protein. The protein in muscle is mostly myosin (thick filaments) and actin (thin filaments), which are contractile proteins that play a big role in muscle contraction. When a muscle contracts it decreases in length due to the shortening of individual fibers. This occurs as a result of the shortening of the distance from Z disc to Z disc. As the sarcomere shortens in length, the A bands do not shorten, although the I bands do. This shortening is actually produced by the sliding of the thin filaments over the thick filaments. This is known as the Sliding Filament Theory. In other words, the bands shorten, the filaments do not.

musclefibre

Cross Bridges

The action of cross bridges results in the sliding of filaments. Cross bridges are part of the myosin proteins that extend from the axis of the thick filaments to form ‘arms’ that terminate in globular ‘heads.’ Each globular head contains an ATP-binding site that is associated with an actin-binding site. The globular head hydrolyzes (splits) ATP into ADP and inorganic phosphate (Pi). When ATP is hydrolyzed, the mysoin head is in the ready state, and thus has the potential energy required for contraction. After the myosin head binds to actin, myosin undergoes a conformational change, causing the cross bridge to produce a power stroke. The power stroke is the force that pulls the thin filaments over the thick filaments. After the power stroke, the bound ATP is released and a new ATP molecule binds to the myosin head. If ADP was not released and a new ATP molecule did not bind to myosin, then the myosin heads would remain bound to actin, resulting in rigor mortis. In rigor mortis, the muscles stiffen until myosin and actin start to decompose, such as after death.

Confusing? Let’s break this down.

  1. A fiber is at rest and a cross bridge is not attached to actin; ATP has been hydrolyzed.
  2. A cross bridge binds to actin.
  3. Pi is released causing a conformational change in the myosin head.
  4. A power stroke causes the thin filaments to slide of the thick filaments; ADP is released.
  5. A new ATP binds to the myosin head which allows it to release from actin.
  6. ATP is hydrolyzed, causing the cross bridge to return to its original orientation…
  7. Back to 1.

 Control of Muscle Contraction

When a muscle is at rest, the calcium concentration in the sarcoplasm (a muscle cell’s cytoplasm) is very low and cross bridges are prevented from attaching to actin. For a muscle to contract, high concentrations of calcium are needed. Action potentials are conducted into the muscle fiber which stimulate the opening of calcium-release channels in the sarcoplasmic reticulum (smooth ER found in muscle cells), causing calcium to diffuse into the sarcoplasm and stimulate contractions. When the action potential ends, the calcium-release channels in the sarcoplasmic reticulum close, allowing calcium to be actively transported out of the sarcoplasm and sarcomeres. This allows the muscle to relax. Without the removal of calcium, the muscle cannot relax.

Adaptations of Muscles to Exercise

Muscle cells grow, or hypertrophy, due to frequent bouts of high-intensity resistance training, such as weight lifting. Hypertrophy means muscle cells grow in size, not in number. Eating a sufficient amount of protein is also important for building muscle.

The opposite of hypertrophy is atrophy, or the reduction in muscle mass. This occurs if a muscle is not being used, such as a broken leg in a cast. Atrophy also occurs as a person ages. Even in health, aging is associated with a progressive decline in muscle function. However, the good news is that muscle remains responsive to resistance training even very late in life, meaning, it is possible to build muscle at an old age.

Plant Biology

This section is intended to get you up to speed with the basics of plant biology. Here at Untamed Science, we think plants are pretty amazing. We’ve got all sorts of fun plant videos. Here is a fun short we created about medicinal plants.

And why not add to that video with a second video introduction into the major forms of plants. These videos were produced in partnership with Pearson Publishing and currently accompanies the Miller and Levine high-school biology textbook.

Plant biology is a branch of biology and that deals with plant life and plant development. Botany is another name for this field of biology. It covers a wide range of scientific disciplines that study plants.  Some of them include structure, growth, reproduction, metabolism, development, diseases, and chemical properties and evolutionary relationships between the different groups. Botany began with tribal efforts to identify edible, medicinal and poisonous plants, making botany one of the oldest sciences. From this ancient interest in plants, the scope of botany has increased to include the study of over 550,000 kinds or species of living organisms. In these Untamed Science pages, we want to cover the basics of plant biology, including everything one might cover in an introductory biology class.  To start things off we created a short introduction to a few of the major forms of plants.

Plant BiologyPlant Topics

As the botanists with UntamedScience add more information this year, we will also add educational videos to these pages. Be patient with us though, these pages are all under construction …

Biological Diversity of Plants

Don’t forget that we have an entire site dedicated to plant diversity, of which we’re slowly adding new species. Here are a few examples. Also, here is a good introduction to botany for further reading.